The security you're describing is likely just NTFS permissions. These are integrated into the NTFS itself, which I believe will function as low as a CLI level. I believe you should be able to *read* the permissions for the directory (right click->properties->security/permissions), but some dialog box warning you that you will be unable to modify the permissions will appear. There's no real easy way to get around these permissions, if they're set up right.
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